Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_6305278_6305413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6305278 - 6305413

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGATG

5'SS Class:

major

3'SS Sequence:

CTGGTTTGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TCCTCCTGCAGC

Flanking Amino Acid:

ELRKAEERRIRRLKNELLEI

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.5

42.7

Major BPS

69.1

0.47

60.7

37.6

Major PPT

65.5

0.35

1.1

43.3

Minor 5ss

-2.4

3.4

38.2

Minor BPS

46.6

-0.2

2.2

58.45

46.5

Associated Gene:

Gene:

SYTL4

Ensembl Gene ID:

ENSAPLG00000007671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028882

6298604 - 6308041

9438

ENSAPLT00000008022

6298604 - 6308041

9438