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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6310522_6310615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6310522 - 6310615

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGGGT

5'SS Class:

major

3'SS Sequence:

TCTCTGTCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CGGGGCTGAGCG

Flanking Amino Acid:

AVDRSLRSVFVGNIPYEATE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

64.2

41.9

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

77.8

0.63

0.8

72.5

32.2

Minor 5ss

-2.8

3.5

38.1

46.8

Minor BPS

38.1

-1

36.44

45.2

Associated Gene:

Gene:

CSTF2

Ensembl Gene ID:

ENSAPLG00000007255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036308

6310302 - 6313533

3232

ENSAPLT00000007585

6310302 - 6313533

3232