Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_6312125_6312251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6312125 - 6312251

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

CTCTCCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CTTTGCTGAGGC

Flanking Amino Acid:

NTPSSQPQPIGGMHVNGAPP

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

62.4

34.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

64.7

0.33

61.2

Minor 5ss

33.6

-1.9

3.4

44.9

37.9

Minor BPS

43.8

-0.4

2.3

58.78

46.1

Associated Gene:

Gene:

CSTF2

Ensembl Gene ID:

ENSAPLG00000007255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036308

6310302 - 6313533

3232

ENSAPLT00000007585

6310302 - 6313533

3232