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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6356240_6363933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6356240 - 6363933

Intron Length:

7694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTGCCCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

GTTGCCCCAACA

Flanking Amino Acid:

GTFHLTDTIPCAGEEKRVGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

66.1

0.36

59.3

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

51.8

0.05

69.53

42.3

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035067

6356198 - 6399666

43469

ENSAPLT00000005291

6356198 - 6403223

47026