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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6375410_6376222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6375410 - 6376222

Intron Length:

813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCTATTATAACT

Flanking Amino Acid:

IYRSNQEPIARSLGPENLLL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

36.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.4

0.64

0.9

77.8

35.6

Minor 5ss

36.5

-1.5

50.8

45.5

Minor BPS

53.3

0.18

1.6

69.79

41.1

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023379

6360039 - 6401963

41925

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000047315

6360039 - 6401963

41925

ENSAPLT00000005291

6356198 - 6403223

47026

ENSAPLT00000041998

6356311 - 6400777

44467

ENSAPLT00000035067

6356198 - 6399666

43469