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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6376288_6376864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6376288 - 6376864

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAACATT

5'SS Class:

major

3'SS Sequence:

TAATCCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCTGCTTTAATC

Flanking Amino Acid:

ATLKNTKKIYGVAVYTGMET

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

72.9

37.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.7

0.51

0.9

34.8

Minor 5ss

39.4

-1.2

3.2

53.9

44.6

Minor BPS

70.6

0.63

1.3

73.34

38.7

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023379

6360039 - 6401963

41925

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000047315

6360039 - 6401963

41925

ENSAPLT00000005291

6356198 - 6403223

47026

ENSAPLT00000041998

6356311 - 6400777

44467

ENSAPLT00000035067

6356198 - 6399666

43469