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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6382639_6383317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6382639 - 6383317

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAC

U12 Branch Point Sequence:

TCCTTCCTACAA

Flanking Amino Acid:

TKVHVDRNAMDGYRTLCVAF

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

52.2

0.06

1.4

64.2

Major PPT

65.2

0.34

1.1

64.8

35.5

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

45.3

-0.3

56.27

43.1

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000047315

6360039 - 6401963

41925

ENSAPLT00000005291

6356198 - 6403223

47026

ENSAPLT00000041998

6356311 - 6400777

44467

ENSAPLT00000035067

6356198 - 6399666

43469

ENSAPLT00000023379

6360039 - 6401963

41925