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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6388737_6389776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6388737 - 6389776

Intron Length:

1040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TCTGTCTCATTT

Flanking Amino Acid:

YQFFCGFSQQPLYDAAYLTM

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.1

75.8

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

81.3

0.7

79.6

25.9

Minor 5ss

-0.3

2.5

62.8

41.8

Minor BPS

48.1

-0

1.9

66.98

44.7

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000047315

6360039 - 6401963

41925

ENSAPLT00000005291

6356198 - 6403223

47026

ENSAPLT00000041998

6356311 - 6400777

44467

ENSAPLT00000035067

6356198 - 6399666

43469

ENSAPLT00000023379

6360039 - 6401963

41925