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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6392381_6393586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6392381 - 6393586

Intron Length:

1206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAACA

5'SS Class:

major

3'SS Sequence:

TGTATGCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGTTTTAATG

Flanking Amino Acid:

QNSSLEDNGKILTAFGVRKL

Intron Amino Acid Position:

1000

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.7

0.47

66.7

44.1

Minor 5ss

39.3

-1.2

2.8

50.5

45.5

Minor BPS

61.1

0.21

1.5

61.64

41.7

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000041998

6356311 - 6400777

44467

ENSAPLT00000035067

6356198 - 6399666

43469