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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6392381_6394121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6392381 - 6394121

Intron Length:

1741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAACA

5'SS Class:

major

3'SS Sequence:

ACGTGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACGCAA

U12 Branch Point Sequence:

GGCAACGCAACG

Flanking Amino Acid:

QNSSLEDNGKVFGNWTFGTI

Intron Amino Acid Position:

996

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.4

Major BPS

47.7

-0.1

1.2

55.4

32.7

Major PPT

74.9

0.56

65.4

Minor 5ss

39.3

-1.2

2.8

50.5

45.5

Minor BPS

37.8

-1

2.2

39.21

43.3

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047315

6360039 - 6401963

41925

ENSAPLT00000023379

6360039 - 6401963

41925

ENSAPLT00000005291

6356198 - 6403223

47026