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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6394188_6395052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6394188 - 6395052

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCCTC

5'SS Class:

major

3'SS Sequence:

TTTATTTACACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTAAAT

Flanking Amino Acid:

TVLVFTVTLKLALDTRFWTW

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

68.3

42.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.7

0.69

0.9

76.7

36.4

Minor 5ss

38.8

-1.3

51.3

45.3

Minor BPS

70.8

0.73

1.3

85.51

34.3

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005291

6356198 - 6403223

47026

ENSAPLT00000041998

6356311 - 6400777

44467

ENSAPLT00000035067

6356198 - 6399666

43469

ENSAPLT00000023379

6360039 - 6401963

41925

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000047315

6360039 - 6401963

41925