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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6395157_6396058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6395157 - 6396058

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTAACCAGAATG

Flanking Amino Acid:

FFSFFWGGVIWPFLKQQRMY

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

90.6

24.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

30.1

-2.3

3.8

42.6

38.5

Minor BPS

49.1

-0.2

1.8

59.5

41.8

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035067

6356198 - 6399666

43469

ENSAPLT00000023379

6360039 - 6401963

41925

ENSAPLT00000023165

6356311 - 6399666

43356

ENSAPLT00000047315

6360039 - 6401963

41925

ENSAPLT00000005291

6356198 - 6403223

47026

ENSAPLT00000041998

6356311 - 6400777

44467