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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6396213_6399570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6396213 - 6399570

Intron Length:

3358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTCGCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

TGTGCTACAAGT

Flanking Amino Acid:

LKNIKEKSHQSSRKAPDSLS

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

74.6

0.55

0.9

68.1

37.5

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

44.5

-0.3

2.1

65.65

44.9

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023379

6360039 - 6401963

41925