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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6396213_6403089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6396213 - 6403089

Intron Length:

6877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTGTATTCTACT

Flanking Amino Acid:

LKNIKEKSHQGQILFL*

Intron Amino Acid Position:

1104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

0.52

1.5

79.6

35.6

Major PPT

76.1

0.59

0.8

67.5

38.7

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

48.7

-0

73.14

43.6

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005291

6356198 - 6403223

47026