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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6398501_6399570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6398501 - 6399570

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTTCC

5'SS Class:

strong_major

3'SS Sequence:

CTCGCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

TGTGCTACAAGT

Flanking Amino Acid:

QQSQLFLERIRAVGRHLIHC

Intron Amino Acid Position:

1143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

73.8

30.8

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

74.6

0.55

0.9

68.1

37.5

Minor 5ss

36.1

-1.6

2.8

45.2

42.8

Minor BPS

44.5

-0.3

2.1

65.65

44.9

Associated Gene:

Gene:

ATP11C

Ensembl Gene ID:

ENSAPLG00000005048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035067

6356198 - 6399666

43469

ENSAPLT00000023165

6356311 - 6399666

43356