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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6435637_6438418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6435637 - 6438418

Intron Length:

2782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTGCATTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTATAC

Flanking Amino Acid:

LRTEKYYQLKEDITAVTKEG

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.9

36.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

74.9

0.56

69.1

40.7

Minor 5ss

44.9

-0.6

2.8

61.5

43.4

Minor BPS

49.6

-0

68.91

42.2

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022571

6415662 - 6465924

50263

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469