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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6439636_6440816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6439636 - 6440816

Intron Length:

1181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCACTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CTTCCTTTCACT

Flanking Amino Acid:

DLSHFDGMAQDLIGKAQVVI

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

68.3

0.41

67.9

31.2

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

64.1

0.52

1.8

80.9

41.2

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469

ENSAPLT00000022571

6415662 - 6465924

50263