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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6442637_6445582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6442637 - 6445582

Intron Length:

2946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAATAT

5'SS Class:

major

3'SS Sequence:

TTCTCTACCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCTCTACCC

Flanking Amino Acid:

SKSPLFSPKHGVDFNSSLKF

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

72.8

32.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

66.2

0.37

64.8

35.4

Minor 5ss

39.1

-1.2

3.3

52.6

45.6

Minor BPS

61.1

0.33

1.9

78.9

36.8

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469

ENSAPLT00000022571

6415662 - 6465924

50263