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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6445672_6446253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6445672 - 6446253

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTTTATCC

Flanking Amino Acid:

TSRKTPSSRKIEVMHDYQEK

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.9

0.88

0.7

81.3

35.7

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

63.8

0.41

1.5

75.07

35.5

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022571

6415662 - 6465924

50263

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469