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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6446641_6448509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6446641 - 6448509

Intron Length:

1869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TAGTGATGAACC

Flanking Amino Acid:

YVEELFTVLTGYRAEMDNPA

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

82.8

0.74

0.8

77.6

31.2

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

47.5

-0.2

2.1

61.91

42.9

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022571

6415662 - 6465924

50263

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469