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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6448810_6449181_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6448810 - 6449181

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTGGTGAC

5'SS Class:

major

3'SS Sequence:

GTTTTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

ERVGFCFLDRREDFQMYEKY

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

58.8

40.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.83

0.8

80.7

31.5

Minor 5ss

27.5

-2.6

3.1

27.1

36.7

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022571

6415662 - 6465924

50263

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469