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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6449275_6449592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6449275 - 6449592

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTGT

5'SS Class:

major

3'SS Sequence:

TCCTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ACTTACTTAATC

Flanking Amino Acid:

RQCSESTFFQECQRKLEHKL

Intron Amino Acid Position:

721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

65.8

42.7

Major BPS

78.2

0.7

77.9

32.1

Major PPT

84.3

0.77

0.8

79.6

32.4

Minor 5ss

38.7

-1.3

3.4

55.4

48.8

Minor BPS

70.1

0.61

1.4

73.71

37.2

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018870

6408456 - 6457479

49024

ENSAPLT00000004481

6408456 - 6460282

51827

ENSAPLT00000047384

6426255 - 6465924

39670

ENSAPLT00000046656

6408456 - 6465924

57469

ENSAPLT00000022571

6415662 - 6465924

50263