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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6459159_6463959_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6459159 - 6463959

Intron Length:

4801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATAT

5'SS Class:

weak_major

3'SS Sequence:

CATTACTTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCTTCATTACTT

Flanking Amino Acid:

DCRFRNAKVADAALCNTRKF

Intron Amino Acid Position:

1137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

70.3

36.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

75.7

0.58

0.9

69.2

36.4

Minor 5ss

54.4

0.15

2.6

73.4

43.4

Minor BPS

61.6

0.44

1.9

80.74

41.5

Associated Gene:

Gene:

MCF2

Ensembl Gene ID:

ENSAPLG00000004315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046656

6408456 - 6465924

57469

ENSAPLT00000022571

6415662 - 6465924

50263

ENSAPLT00000047384

6426255 - 6465924

39670