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Intron Name: Anas_platyrhynchos_platyrhynchos_10_657668_658208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

657668 - 658208

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TGCTTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTGCTTTATTT

Flanking Amino Acid:

TLDEPVKDTIMRDLKAVGKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

73.5

37.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.6

0.76

0.8

81.4

Minor 5ss

46.4

-0.4

2.8

64.2

41.3

Minor BPS

54.9

0.23

1.7

69.31

42.7

Associated Gene:

Gene:

YIPF6

Ensembl Gene ID:

ENSAPLG00000007545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007830

656706 - 660795

4090