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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7106856_7107451_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7106856 - 7107451

Intron Length:
596

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGGCTC

5'SS Class:
major

3'SS Sequence:
ATTTCATTCAAAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TATCTTTTAATC

Flanking Amino Acid:
IGAYFGFKEKPIEHPVRTNQ

Intron Amino Acid Position:
480

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
68.9
38.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
68
0.41
1.1
68
36.3

Minor 5ss
33.9
-1.8
3.7
49.6
47

Minor BPS
69.1
0.58
1.1
72.36
32.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7097173 - 7127809
30637