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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7158551_7163366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7158551 - 7163366

Intron Length:

4816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

TTTGCTTTACCA

Flanking Amino Acid:

TLTAVNKATEDQPSKGPCSH

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

80.3

0.68

0.9

74.2

40.2

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

66.7

0.52

1.7

78.6

38.6

Associated Gene:

Gene:

ARHGEF6

Ensembl Gene ID:

ENSAPLG00000011391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039039

7149844 - 7185976

36133

ENSAPLT00000011994

7149844 - 7185976

36133