Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7166800_7168255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7166800 - 7168255

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAG

U12 Branch Point Sequence:

TGTCTCTCACCC

Flanking Amino Acid:

TQLTKNYYPVVLQNILETER

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

62.8

0.32

1.5

69.9

35.3

Major PPT

70.7

0.47

0.8

63.1

32.9

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

49.7

-0

1.8

64.67

40.6

Associated Gene:

Gene:

ARHGEF6

Ensembl Gene ID:

ENSAPLG00000011391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039039

7149844 - 7185976

36133

ENSAPLT00000011994

7149844 - 7185976

36133