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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7193242_7194581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7193242 - 7194581

Intron Length:

1340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

TTTCTCCTCACA

Flanking Amino Acid:

AGLKSNKAVPVLEWNKTSYA

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

85.4

0.8

0.7

80.2

25.2

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

51.9

0.05

2.1

73.2

38.4

Associated Gene:

Gene:

CD40LG

Ensembl Gene ID:

ENSAPLG00000012271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012796

7192874 - 7198328

5455