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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7196196_7198016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7196196 - 7198016

Intron Length:

1821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCGCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAC

U12 Branch Point Sequence:

AGCCCATTGACC

Flanking Amino Acid:

CLYLHMKMDKMEEALSLNED

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

66.4

0.41

58.7

38.1

Major PPT

61.8

0.27

56.3

33.5

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

0.05

1.6

59.94

38.7

Associated Gene:

Gene:

CD40LG

Ensembl Gene ID:

ENSAPLG00000012271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012796

7192874 - 7198328

5455