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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7217122_7217965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7217122 - 7217965

Intron Length:

844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTATGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

CAGTCCTGATAA

Flanking Amino Acid:

PSTSASHATAGIQIHDRRRD

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

80.4

0.68

0.9

77.1

36.9

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

47.1

-0.2

1.8

54.81

43.4

Associated Gene:

Gene:

VGLL1

Ensembl Gene ID:

ENSAPLG00000012400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012903

7217081 - 7224930

7850