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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7218032_7220011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7218032 - 7220011

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TCTTCTTTTAAG

Flanking Amino Acid:

NISQSSVPGGDRKANSYQGS

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

81.6

0.71

0.9

86.7

24.6

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

56.6

0.06

1.8

64.21

43.7

Associated Gene:

Gene:

VGLL1

Ensembl Gene ID:

ENSAPLG00000012400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012903

7217081 - 7224930

7850