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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7231738_7232241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7231738 - 7232241

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGGTATT

5'SS Class:

major

3'SS Sequence:

TCTCCCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

ATACTGTTAAAT

Flanking Amino Acid:

GQVKKVLIFDRHPDGVASVS

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

83.8

34.5

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

82.8

0.74

0.7

76.2

Minor 5ss

42.7

-0.8

3.2

40.7

Minor BPS

49.1

0.01

2.1

69.9

40.5

Associated Gene:

Gene:

HTATSF1

Ensembl Gene ID:

ENSAPLG00000012401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012930

7230906 - 7251196

20291

ENSAPLT00000031105

7225562 - 7239943

14382