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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7232332_7232608_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7232332 - 7232608

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

GATTGCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GAATGTTTAATG

Flanking Amino Acid:

RNMFHPKDFEEDPLVLNEIR

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

71.4

0.48

63.1

42.6

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

51.2

-0.1

1.8

53.92

41.4

Associated Gene:

Gene:

HTATSF1

Ensembl Gene ID:

ENSAPLG00000012401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031105

7225562 - 7239943

14382

ENSAPLT00000012930

7230906 - 7251196

20291