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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7232709_7234344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7232709 - 7234344

Intron Length:

1636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

TTCATTTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TGTTGCTTCATT

Flanking Amino Acid:

DYKKKLSQQQKQLDWRPEKK

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.2

78.4

35.4

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

74.2

0.54

0.9

74.8

34.7

Minor 5ss

45.8

-0.4

2.5

61.8

36.4

Minor BPS

57.4

0.31

2.2

80.32

42.1

Associated Gene:

Gene:

HTATSF1

Ensembl Gene ID:

ENSAPLG00000012401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012930

7230906 - 7251196

20291

ENSAPLT00000031105

7225562 - 7239943

14382