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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7234509_7235645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7234509 - 7235645

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTTAAAG

Flanking Amino Acid:

KGDGLCCYLKRESVQLALRL

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.4

0.55

0.9

69.2

36.1

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

66.7

0.39

1.4

68.86

38.5

Associated Gene:

Gene:

HTATSF1

Ensembl Gene ID:

ENSAPLG00000012401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031105

7225562 - 7239943

14382

ENSAPLT00000012930

7230906 - 7251196

20291