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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7235801_7236520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7235801 - 7236520

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

ACATACTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TCTGTTTTAACA

Flanking Amino Acid:

EDRNTNVYVTGLPPDITKDE

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

81.8

31.8

Major BPS

89.7

0.98

0.7

89.9

Major PPT

69.2

0.43

0.9

62.6

38.5

Minor 5ss

36.5

-1.5

2.7

46.6

41.8

Minor BPS

69.5

0.61

1.3

73.92

38.7

Associated Gene:

Gene:

HTATSF1

Ensembl Gene ID:

ENSAPLG00000012401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012930

7230906 - 7251196

20291

ENSAPLT00000031105

7225562 - 7239943

14382