Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_726093_726296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

726093 - 726296

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TCTTCCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGGAAA

U12 Branch Point Sequence:

TCGGAGGGAAAC

Flanking Amino Acid:

ARGYSTTIYLGLNLAAFITI

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

56.7

42.7

Major BPS

40.6

-0.5

1.3

39.1

Major PPT

85.4

0.8

0.7

77.3

31.4

Minor 5ss

33.3

-1.9

35.1

Minor BPS

29.8

-1.5

2.4

36.72

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017070

724755 - 738015

13261