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Intron Name: Anas_platyrhynchos_platyrhynchos_10_732671_732966_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
732671 - 732966

Intron Length:
296

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTATC

5'SS Class:
major

3'SS Sequence:
CATTTTTTAATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTCCAT

U12 Branch Point Sequence:
CATTTTTTAATA

Flanking Amino Acid:
QFARYRRLRKLFLQNNKIRM

Intron Amino Acid Position:
154

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
74.7
35.4

Major BPS
59.5
0.24
1.5
72.5
43.5

Major PPT
76.5
0.6
0.9
73.6
35.4

Minor 5ss
37.8
-1.4
3
55.7
41.6

Minor BPS
70.2
0.63
1.2
71.36
35.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

724755 - 738015
13261