Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7339689_7341798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7339689 - 7341798

Intron Length:

2110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGGA

5'SS Class:

major

3'SS Sequence:

TGTCCTCGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTATAGAATC

Flanking Amino Acid:

TLSADGQDPSASASSISSPV

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

66.1

40.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

75.8

0.58

0.9

73.3

37.1

Minor 5ss

35.3

-1.7

3.4

47.8

47.6

Minor BPS

49.6

-0

1.9

69.29

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013190

7330266 - 7356371

26106

ENSAPLT00000028327

7330284 - 7356371

26088