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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7343230_7348015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7343230 - 7348015

Intron Length:

4786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTAAACGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAC

Flanking Amino Acid:

AVAASTKTKEESGSKAVAGT

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.9

0.45

62.2

43.7

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

68.8

0.57

1.3

76.65

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028327

7330284 - 7356371

26088

ENSAPLT00000013190

7330266 - 7356371

26106