Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7350699_7350958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7350699 - 7350958

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CCCATTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

TTTTCCCCATTT

Flanking Amino Acid:

NMQERLERKKRIEEIMKRTR

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

69.9

43.4

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

72.7

0.51

0.9

68.1

36.2

Minor 5ss

44.5

-0.6

3.2

65.1

46.1

Minor BPS

52.4

0.16

2.1

81.17

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013190

7330266 - 7356371

26106