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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7353498_7354878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7353498 - 7354878

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCAA

5'SS Class:

major

3'SS Sequence:

GCTCTCTGGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TGATGGTTAAAT

Flanking Amino Acid:

SLTKPIDSSSEL*

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

40.2

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

64.3

0.32

1.1

60.2

40.5

Minor 5ss

37.2

-1.4

47.6

47.8

Minor BPS

47.4

-0.1

2.5

70.97

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028327

7330284 - 7356371

26088

ENSAPLT00000013190

7330266 - 7356371

26106