Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7417031_7417837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7417031 - 7417837

Intron Length:

807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CCCTCTCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TATTTAGTAATC

Flanking Amino Acid:

EKEDETLPIDIVLQTLLAFA

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

63.1

43.4

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

78.4

0.64

0.7

71.8

26.5

Minor 5ss

-2.5

30.4

36.1

Minor BPS

49.5

-0

2.2

68.12

37.6

Associated Gene:

Gene:

MMGT1

Ensembl Gene ID:

ENSAPLG00000018112

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034922

7415966 - 7420057

4092