Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7448369_7449202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7448369 - 7449202

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTAATCTTAATG

Flanking Amino Acid:

AITQMCEVTGGRSYCVRTQR

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.3

0.52

0.9

68.8

36.6

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

62.8

0.26

1.4

61.54

40.3

Associated Gene:

Gene:

INTS6L

Ensembl Gene ID:

ENSAPLG00000013725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034140

7430768 - 7477499

46732

ENSAPLT00000030272

7429917 - 7467545

37629

ENSAPLT00000029179

7430768 - 7467545

36778

ENSAPLT00000014309

7430768 - 7475996

45229

ENSAPLT00000045528

7429917 - 7467545

37629