Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7489305_7494270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7489305 - 7494270

Intron Length:

4966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

MOSPD1

Ensembl Gene ID:

ENSAPLG00000013746

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031118

7488680 - 7502922

14243

ENSAPLT00000018508

7488680 - 7500996

12317