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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7604299_7607822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7604299 - 7607822

Intron Length:

3524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TTTTTTTGTATA

Flanking Amino Acid:

APWRPPAPASWTERLAREIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

86.6

0.82

0.8

84.2

30.9

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

53.5

0.1

1.7

71.08

35.7

Associated Gene:

Gene:

HPRT1

Ensembl Gene ID:

ENSAPLG00000021425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018916

7590707 - 7607977

17271