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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7621171_7621785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7621171 - 7621785

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTGTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTTCTTTTATT

Flanking Amino Acid:

YIENMSRGIYKLYCKNHSGN

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

75.3

32.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.7

0.51

73.6

41.7

Minor 5ss

36.5

-1.5

2.9

45.8

35.7

Minor BPS

69.8

0.7

1.5

84.47

36.2

Associated Gene:

Gene:

PHF6

Ensembl Gene ID:

ENSAPLG00000014748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047113

7617299 - 7643017

25719

ENSAPLT00000015392

7620392 - 7643017

22626