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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7621920_7622351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7621920 - 7622351

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

TTCTCTTTAACA

Flanking Amino Acid:

LQEIKRGKRMKCTLCSQPGA

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

79.7

33.4

Major BPS

56.6

0.16

1.2

49.3

Major PPT

83.5

0.75

0.8

80.5

30.1

Minor 5ss

46.5

-0.4

2.5

59.7

39.2

Minor BPS

85.2

1.1

86.93

31.8

Associated Gene:

Gene:

PHF6

Ensembl Gene ID:

ENSAPLG00000014748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047113

7617299 - 7643017

25719

ENSAPLT00000015392

7620392 - 7643017

22626