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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7622457_7623657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7622457 - 7623657

Intron Length:

1201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

GTGATCTGAAAT

Flanking Amino Acid:

KKAAAHYKCMLFSSGTVQLT

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.8

79.3

28.9

Major BPS

68.1

0.45

58.1

38.5

Major PPT

82.2

0.72

0.9

75.5

38.3

Minor 5ss

30.7

-2.2

2.6

33.5

35.6

Minor BPS

51.7

0.13

1.6

67.71

42.4

Associated Gene:

Gene:

PHF6

Ensembl Gene ID:

ENSAPLG00000014748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047113

7617299 - 7643017

25719

ENSAPLT00000015392

7620392 - 7643017

22626