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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7706281_7762970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7706281 - 7762970

Intron Length:

56690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ATCATCTTAACT

Flanking Amino Acid:

LVIQNAAVFQEAFEIVVRHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

88.6

0.87

0.7

83.9

31.1

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

74.1

0.84

1.2

82.72

38.4

Associated Gene:

Gene:

GPC3

Ensembl Gene ID:

ENSAPLG00000014901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036183

7705949 - 7909190

203242

ENSAPLT00000015537

7705949 - 7845477

139529